The long-term couple have had private meetings with Pastor Rich Wilkerson Jr., who officiated Kim Kardashian and Kanye West's wedding in Florence, Italy, in May, to help save their romance after it recently hit the rocks.
A source told TMZ.com: ''Pastor Rich Wilkerson Jr. is actually counselling Kourtney and Scott over their relationship problems.''
The pair - who have been together for eight years - have called on the pastor for advice after they had a number of arguments over Scott's alleged out-of-control partying.
The duo's relationship woes kicked off last month after Kourtney, 35 - who is expecting the couple's third child - reportedly threw Scott out of their rented property in the Hamptons, New York, following a furious row over his heavy drinking and wild antics.
Despite the regular disagreements, friends of the pair insist it won't mean the end for the couple - who have four-year-old son Mason and two-year-old daughter Penelope together - as they regularly get into arguments over the same topic.
A source said previously: ''Same old s**t. They fight, get back together, he parties, she doesn't like it.''
The actress spoke about raising her 11 year old daughter Matilda in the wake of Heath Ledger's death eight years ago.